Cells from passages 3–5 were cultured in proteinfree medium. After 24 hrs, supernatants were subjected to 1D gel electrophoresis followed by nanoflow liquid chromatography and MS/MS fragmentation analysis. Data were Tariquidar price organized by the CPL/MUW proteomics database. We identified more than 250 proteins encompassing selleck screening library extracellular matrix proteins (collagens,

fibrillin-1, fibulin-3, endothelial cell-selective adhesion molecule, dystroglycan, laminins, multimerin-1, proteoglycan-I, perlecan), proteases (MMPs, ADAMs, legumain, serine proteases 23 and HTRA1), peptidases (aminopeptidases, angiotensinase C, carboxypeptidase C and E, dipeptidyl-peptidase 2 and gamma-glu-X carboxypeptidase), protease inhibitors (TIMPs, PAI-1, serpin I2), growth factors (CTGF, PDGFs, SDF) and cytokines (interleukin-6, -8). By comparison with various

other cell types (fibroblasts, VEGF and Il-1β activated HUVEC) we could establish protein profiles typical for various functional states. HLEC generated a proinflammatory microenvironment (secretion of IL-6, IL-8, several other inflammation associated proteins). The microenvironment generated by HTEC was characterized by growth factors (PDGF-A, CTGF) and other proteins associated with angiogenic activation, promotion of cell survival and cell growth. These results provide the up to now most comprehensive protein maps of the secretome of endothelial cells and demonstrate the value of proteomics to investigate the tissue microenvironment. O134 Changes in Proteomic Expression Patterns GW3965 concentration of Tumour Associated

Fibroblasts (TAF) by Interaction with Urinary Bladder Carcinoma Cells Astrid Enkelmann 1 , Niko Escher2, Martina Walter1, Michaela Weidig3, Heiko Wunderlich1, mafosfamide Kerstin Junker1 1 Department of Urology, University Hospitals Jena, Jena, Germany, 2 Core Unit Chip Application, University Hospitals Jena, Jena, Germany, 3 Department of Pathology, University Hospitals Jena, Jena, Germany Background: Tumour development and progression are strongly affected by interaction of tumour cells and tumour stroma. For different tumour models (e.g. breast cancer) a supportive effect of TAF on the tumour genesis was demonstrated. Aims of the present work are the isolation and proteomic characterisation of TAF from primary urinary bladder tumour specimen. A further part of this study will deal with the influence of urinary bladder carcinoma cell lines on protein expression of TAF. Material and Methods: TAF were isolated from cultured urinary bladder tumour specimen. Therefore, primary tumour material was treated with EDTA followed by differential trypsinisation. Non-tumour fibroblasts were isolated from foreskin and normal urinary bladder tissue. Analyses of protein patterns were carried out on cultivated fibroblasts by SELDI-TOF-MS.